De-extinction
De-extinction (also known as resurrection biology, or species revivalism) is the process of generating an organism that either resembles or is an extinct species.
Methods
Cloning
Cloning is a commonly suggested method for the potential restoration of an extinct species. It can be done by extracting the nucleus from a preserved cell from the extinct species and swapping it into an egg, without a nucleus, of that species' nearest living relative.
Genome editing
Genome editing has been rapidly advancing with the help of the CRISPR/Cas systems, particularly CRISPR/Cas9. The CRISPR/Cas9 system was originally discovered as part of the bacterial immune system.
By using cells from a closely related species to the extinct species, genome editing can play a role in the de-extinction process. Germ cells may be edited directly, so that the egg and sperm produced by the extant parent species will produce offspring of the extinct species, or somatic cells may be edited and transferred via somatic cell nuclear transfer. The result is an animal which is not completely the extinct species, but rather a hybrid of the extinct species and the closely related, non-extinct species. Because it is possible to sequence and assemble the genome of extinct organisms from highly degraded tissues, this technique enables scientists to pursue de-extinction in a wider array of species, including those for which no well-preserved remains exist.
Back breeding
Back breeding is a form of selective breeding. As opposed to breeding animals for a trait to advance the species in selective breeding, back breeding involves breeding animals for an ancestral characteristic that may not be seen throughout the species as frequently.
Iterative evolution
A natural process of de-extinction is iterative evolution. This occurs when a species becomes extinct, but then after some time a different species evolves into an almost identical creature. For example, the Aldabra rail was a flightless bird that lived on the island of Aldabra. It had evolved some time in the past from the flighted white-throated rail, but became extinct about 136,000 years ago due to an unknown event that caused sea levels to rise. About 100,000 years ago, sea levels dropped and the island reappeared, with no fauna. The white-throated rail recolonized the island, but soon evolved into a flightless species taxonomically identical to the extinct species.
Herbarium specimens for de-extincting plants
Not all extinct plants have herbarium specimens that contain seeds. Of those that do, there is ongoing discussion on how to coax barely alive embryos back to life.
Advantages of de-extinction
The technologies being developed for de-extinction could lead to large advances in various fields:
Prioritising de-extinction could lead to the improvement of current conservation strategies. Conservation measures would initially be necessary in order to reintroduce a species into the ecosystem, until the revived population can sustain itself in the wild.
Disadvantages of de-extinction
The reintroduction of extinct species could have a negative impact on extant species and their ecosystem. The extinct species' ecological niche may have been filled in its former habitat, making it an invasive species. This could lead to the extinction of other species due to competition for food or other competitive exclusion. It could lead to the extinction of prey species if they have more predators in an environment that had few predators before the reintroduction of an extinct species.
De-extinction is a very expensive process. Bringing back one species can cost millions of dollars. The money for de-extinction would most likely come from current conservation efforts. These efforts could be weakened if funding is taken from conservation and put into de-extinction. This would mean that critically endangered species would start to go extinct faster because there are no longer resources that are needed to maintain their populations.
Current candidates for de-extinction
Woolly mammoth
The existence of preserved soft tissue remains and DNA from woolly mammoths (Mammuthus primigenius) has led to the idea that the species could be recreated by scientific means. Two methods have been proposed to achieve this. The first would be to use the cloning process, however even the most intact mammoth samples have had little usable DNA because of their conditions of preservation. There is not enough DNA intact to guide the production of an embryo.
In March 2014, the Russian Association of Medical Anthropologists reported that blood recovered from a frozen mammoth carcass in 2013 would now provide a good opportunity for cloning the woolly mammoth.
George Church has hypothesized the positive effects of bringing back the extinct woolly mammoth would have on the environment, such as the potential for reversing some of the damage caused by global warming.
Pyrenean ibex
The Pyrenean ibex (Capra pyrenaica pyrenaica) was a subspecies of Iberian ibex that lived on the Iberian Peninsula. While it was abundant through medieval times, over-hunting in the 19th and 20th centuries led to its demise. In 1999, only a single female named Celia was left alive in Ordesa National Park. Scientists captured her, took a tissue sample from her ear, collared her, then released her back into the wild, where she lived until she was found dead in 2000, having been crushed by a fallen tree.
In 2003, scientists used the tissue sample to attempt to clone Celia and resurrect the extinct subspecies. Despite having successfully transferred nuclei from her cells into domestic goat egg cells and impregnating 208 female goats, only one came to term. The baby ibex that was born had a lung defect, and lived for only seven minutes before suffocating from being incapable of breathing oxygen. Nevertheless, her birth was seen as a triumph and is considered the first de-extinction.
A problem to be faced, in addition to the many challenges of reproduction of a mammal by cloning, is that only females can be produced by cloning the female individual Celia, and no males exist for those females to reproduce with. This could potentially be addressed by breeding female clones with the closely related Southeastern Spanish ibex, and gradually creating a hybrid animal that will eventually bear more resemblance to the Pyrenean ibex than the Southeastern Spanish ibex.
Aurochs
The aurochs (Bos primigenius) was widespread across Eurasia, North Africa, and the Indian subcontinent during the Pleistocene, but only the European aurochs (B. p. primigenius) survived into historical times.
However, because the aurochs is ancestral to most modern cattle breeds, it is possible for it to be brought back through selective or back breeding. The first attempt at this was by Heinz and Lutz Heck using modern cattle breeds, which resulted in the creation of Heck cattle. This breed has been introduced to nature preserves across Europe; however, it differs strongly from the aurochs in physical characteristics, and some modern attempts claim to try to create an animal that is nearly identical to the aurochs in morphology, behavior, and even genetics.
A competing project to recreate the aurochs is the Uruz Project by the True Nature Foundation, which aims to recreate the aurochs by a more efficient breeding strategy using genome editing, in order to decrease the number of generations of breeding needed and the ability to quickly eliminate undesired traits from the population of aurochs-like cattle.
Quagga
The quagga (Equus quagga quagga) is a subspecies of the plains zebra that was distinct in that it was striped on its face and upper torso, but its rear abdomen was a solid brown. It was native to South Africa, but was wiped out in the wild due to overhunting for sport, and the last individual died in 1883 in the Amsterdam Zoo.
Thylacine
The thylacine (Thylacinus cynocephalus), commonly known as the Tasmanian tiger, was native to the Australian mainland, Tasmania and New Guinea. It is believed to have become extinct in the 20th century. The thylacine had become extremely rare or extinct on the Australian mainland before British settlement of the continent. The last known thylacine died at the Hobart Zoo, on September 7, 1936. He is believed to have died as the result of neglect—locked out of his sheltered sleeping quarters, he was exposed to a rare occurrence of extreme Tasmanian weather: extreme heat during the day and freezing temperatures at night.
In December 2017, it was announced in Nature Ecology and Evolution that the full nuclear genome of the thylacine had been successfully sequenced, marking the completion of the critical first step toward de-extinction that began in 2008, with the extraction of the DNA samples from the preserved pouch specimen.
In August 2022, the University of Melbourne and Colossal Biosciences announced a partnership to accelerate de-extinction of the thylacine via genetic modification of one of its closest living relatives, the fat-tailed dunnart.
Passenger pigeon
The passenger pigeon (Ectopistes migratorius) numbered in the billions before being wiped out due to unsustainable commercial hunting and habitat loss during the early 20th century. The non-profit Revive & Restore obtained DNA from the passenger pigeon from museum specimens and skins; however, this DNA is degraded because it is so old. For this reason, simple cloning would not be an effective way to perform de-extinction for this species because parts of the genome would be missing. Instead, Revive & Restore focuses on identifying mutations in the DNA that would cause a phenotypic difference between the extinct passenger pigeon and its closest living relative, the band-tailed pigeon. In doing this, they can determine how to modify the DNA of the band-tailed pigeon to change the traits to mimic the traits of the passenger pigeon. In this sense, the de-extinct passenger pigeon would not be genetically identical to the extinct passenger pigeon, but it would have the same traits. In 2015, the de-extinct passenger pigeon hybrid was forecast ready for captive breeding by 2024 and released into the wild by 2030.
Maclear's rat
The Maclear's rat (Rattus macleari), also known as the Christmas Island rat, was a large rat endemic to Christmas Island in the Indian Ocean. It is believed Maclear's rat might have been responsible for keeping the population of Christmas Island red crab in check. It is thought that the accidental introduction of black rats by the Challenger expedition infected the Maclear's rats with a disease (possibly a trypanosome),